CDS

Accession Number TCMCG006C103359
gbkey CDS
Protein Id XP_013664155.1
Location join(6137568..6137665,6139796..6139874,6139943..6140058,6140215..6140265,6140413..6140532,6140642..6140761,6140835..6140970,6141126..6141296,6141437..6141592,6141714..6141820,6141931..6142021,6142105..6142246,6142336..6142495,6142645..6142761,6142887..6143250)
Gene LOC106368688
GeneID 106368688
Organism Brassica napus

Protein

Length 675aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013808701.2
Definition probable rhamnogalacturonate lyase B [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Polysaccharide lyase family 4, domain II
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGAAACTCGGAGCTCCGAGAAAGAAGTCGGGTTGGGTTATGCTCCAAGTTCTTCTTCTGCATCTCCTTGTTCAAAGTGTTCATTCTCAGAACTCACGAAACAAACTAAACATCACAAATCCTGGACAAAGTATACCAGGCTTAGCAGTTCAGCTAAGGAGAGTTAGTAATGAGAAGGTGGTAGTTGATAATGGTATTATTCAAGTTACTTTCTCGAGCCCACAAGGTTTGATAACTGGAATCAAATATAATGGCATCGATAACGTGTTGGACGACGAAATTGACGATCGTGGGTATTGGGACATAGTATGGTATGAACCGGAAAAGGCATTGGAAATTGACAAACTAGAAGGAACTAAATTCGAAATCATAACTCAGAACGAAGAACAAGTTGAAATTTCATTTACAAGGACGTGGACAATCTCGAAACGTGGCTCCTTGGTCCCCCTTAACGTAGATAAAAGGTACATTATTCGAACTGGTGTCTCCGGAATATACATGTACGGTATATTAGAGAGGTTAGAAGGTTGGCCCGACGTGGACATGGACCAGATTAGGATCGTCTTCAAGCTCAACCCCAAAAAATTTGATTTCATGGCGATATCTGATGACCGGCAGAGAAGCATGCCATCCATGGCTGATCGAGACAATGCTAAGATATTAGCTTACAAAGAAGCTGTTCTCTTGACAAACCCGAAGAACCCTATGTTTAAAGGAGAGGTGGACGATAAGTATATGTACTCAATGGAAGACAAAGACAACAACGTTCATGGTTGGATCTCGTCGGACCCACCGGTTGGGTTTTGGATGATAACTCCAAGCGATGAGTTCCGACTTGGTGGGCCCATCAAGCAAGACCTCACCTCTCACGCCGGACCCATCACCCTGTCCATGTTTACGAGCACTCATTACGCGGGGAAAGAGATGAGAATGGATTATAGAAATGGAGAGCCATGGAAGAAGGTTTTTGGACCTGTCTTGGCTTATCTCAACTCTGTCTCTCCCAAAGATTCCACTCTTCGTCTCTGGAAAGATGCTAAACGACAGATGGCTGTAGAAGTTAGAAGCTGGCCTTATGATTTTGTAAATTCAGAAGACTATCCCCTTTCTCATCAGAGAGGAACGATAGAAGGTCAATTCTATATCAAAGACCGATACGTGTCAAGACTAAATATATATGGGAAATTTGCTTTTGTTGGTTTGGCACCATGTGGTGAAGCCGGTTCATGGCAAACCGAATCAAAGGGGTATCAGTTTTGGACGAAAGCTGACAGAAAAGGAAGATTCATAATAGATAATGTGAGGGCAGGCAATTATAGTCTCTACGCATGGGGTTATGGTTTTATCGGTGACTATAAATATGAACAAAACATTACCATCACGCCAGGTAGCCAGATGAATGTAGGGCCTCTAGTGTATGAGCCACCTAGAAACGGTCCAACGTTGTGGGAAATAGGTGTACCGGACCGAACAGCCGGAGAGTTCTATATACCGGATCCTTACCCTACACTTATGAATAAGCTTTATGTTAACCCACTTCAAGATAGATTCAGACAATATGGATTGTGGGATCGTTACGCAGATTTATACCCTCAAAACGATCTTGTCTACACAGTCGGTGTTAGTGATTATAAAAGAGATTGGTTCTTTGCACATGTCACCAGAAATGTTGGAAATAATACATACGATTCAACGACATGGCAAATCATATTTAACCTGGAAAACGTGAACCGGGTCGGTCTCTACACGCTCAGAATAGCTCTAGCCTCAGCCGCTGATTCCGAGTTACAAGTTCGGGTCAACAATCCGAAGTCCGATCATATTTTCACGACCGGTTTAATCGGAAAAGACAATGCCATTGCAAGACATGGGATTCATGGGTTATATAGATTGTATAGTATCAACGTTGCTGGAGATTTACTAAGTGTTGGTGATAATACCATATATTTAACTCAATCGAGAAGTGTAGGACCTTTTCAAGGTGTTATGTATGATTATATTCGTCTTGAAAGTCCTTTTACAACTTGA
Protein:  
MKLGAPRKKSGWVMLQVLLLHLLVQSVHSQNSRNKLNITNPGQSIPGLAVQLRRVSNEKVVVDNGIIQVTFSSPQGLITGIKYNGIDNVLDDEIDDRGYWDIVWYEPEKALEIDKLEGTKFEIITQNEEQVEISFTRTWTISKRGSLVPLNVDKRYIIRTGVSGIYMYGILERLEGWPDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMADRDNAKILAYKEAVLLTNPKNPMFKGEVDDKYMYSMEDKDNNVHGWISSDPPVGFWMITPSDEFRLGGPIKQDLTSHAGPITLSMFTSTHYAGKEMRMDYRNGEPWKKVFGPVLAYLNSVSPKDSTLRLWKDAKRQMAVEVRSWPYDFVNSEDYPLSHQRGTIEGQFYIKDRYVSRLNIYGKFAFVGLAPCGEAGSWQTESKGYQFWTKADRKGRFIIDNVRAGNYSLYAWGYGFIGDYKYEQNITITPGSQMNVGPLVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNPLQDRFRQYGLWDRYADLYPQNDLVYTVGVSDYKRDWFFAHVTRNVGNNTYDSTTWQIIFNLENVNRVGLYTLRIALASAADSELQVRVNNPKSDHIFTTGLIGKDNAIARHGIHGLYRLYSINVAGDLLSVGDNTIYLTQSRSVGPFQGVMYDYIRLESPFTT